Oh I like this. MARVEL was built on the idea that, unlike other superhero comics of the time, these characters would be normal people with extraordinary gifts who still lived in a world in which rent was paid, heroes worked real jobs, had real issues, pathos, etc. and weren't just constantly fighting bad guys. Part of being a normal person would be falling into certain ideologies; religious, political and philosophical. The challenge for the writer is to be able to portray a character in this ideology genuinely, which can be difficult if it's an ideology he or she does not subscribe to, especially when it comes to partisan politics. If you're liberal, you may tend to portray a conservative poorly, or vice versa.
Civil War was a pretty good portrayal of the debate over the Patriot Act (Give the government more power to spy on you for your protection or harm). Iron Man represented the protection of the people by the government and Cap represented the protection of people from the government, but both arguments had merit based on perspective; if I was a non-powered civilian, worried about Nitro blowing up my kids, I'd side with Stark. If I was a meta-human worried about being punished for being a hero, I'd probably side with Cap.
I'd like to see more stories that show that rift within the super-hero community (without it turning into another hero v hero cross-over event, just like... social tension, arguments, or different approaches to crime fighting) like we see within the United States. It's easy to paint those we disagree with as wrong. It's for a skilled writer to find the merits and flaws of both sides of contentious issue.