I agree. This was definitely a VERY heavy Tim issue, and so many awesome Easter eggs (haha, Easter!) for fans of the Dixon Robin years, and the Red Robin series, and several other things. It was really awesome to see Eddy Barrows doing the future stuff, since he's done so much of it before, if you look at the issues it's featured in (the cover for Batwoman #6, Pax Batmana, the first two issues of Lonely Place of Living, and now the first half of this issue - I don't know if that was on purpose, but it feels very appropriate). And I agree - I think the General (and Brother Eye, depending on how sentient it is) is manipulating the future records. It feels too dramatic and compressed.
I think in terms of Kate's choice in the future simulation, Bruce is clearly acting in a way that justifies the No Man's Land, so I'd say Kate sees it as pretty similar to the Clayface situation - he's putting thousands if not millions of lives at risk. For all we know, she's preventing the OMAC Crisis thingy (since we know that OMAC is coming!)
I'm betting that in the issue where Kate, Jean-Paul, and Luke are saluting on the cover, we'll get some more Colony stuff.