1-4. Megatron Origin #1-4
5. Spotlight - Orion Pax
6. Spotlight - Blurr
7-18. Autocracy #1-12
19. Spotlight - Thundercracker
20-23. Monstrosity #1-4
24-27. Primacy #1-4
28. Spotlight - Shockwave
29. Spotlight - Cliffjumper
30. Spotlight - Wheelie
31. Spotlight - Hot Rod
32. Spotlight - Sixshot
33. Spotlight - Ultra Magnus
34. Spotlight - Soundwave
35-38. Infiltration #0-3
39-41. Stormbringer #1-3
42-43. Infiltration #4-5
44. Stormbringer #4
45. Infiltration #6
46. Spotlight - Kup
47-50. New Avengers/Transformers #1-4
51-52. Escalation #1-2
53. Spotlight - Nightbeat
55-57. Escalation #3-6
58. Spotlight - Ramjet
59. Spotlight - Galvatron
60. Spotlight - Optimus Prime
61-64. Devastation #1-4
65. Spotlight - Blaster
66. Spotlight - Arcee
67-68. Devastation #5-6
69. Spotlight - Mirage
70. Spotlight - Grimlock
71-74. Revelation #1-4 (contains Spotlights on Cyclonus, Hardhead, Doubledealer & Sideswipe)
75-79. Maximum Dinobots #1-5
80. Spotlight - Drift
81. All Hail Megatron #15
82. Spotlight - Metroplex
83. Spotlight - Jazz
84-98. All Hail Megatron #1-14 & 16
99. Continuum
100. Spotlight - Prowl
101. Last Stand of the Wreckers #1
102. Transformers #1
103-104. Last Stand of the Wreckers #2-3
105. Transformers #2
106. Last Stand of the Wreckers #4
107-108. Transformers #3-4
109-112. Bumblebee #1-4
113-114. Transformers #5-6
115. Last Stand of the Wreckers #5
116-119. Ironhide #1-4
120-121. Transformers #7-8
122-125. Drift #1-4
126-127. Heart of Darkness #1-2
128-129. Infestation #1-2 (Transformers series)
130-134. Transformers #9-13
135. Spotlight - Megatron
136-142. Transformers #14-20
143-144. Heart of Darkness #3-4
145-153. Transformers #21-29
154. Spotlight - Bumblebee
155-156. Transformers #30-31
157. Transformers: Death of Optimus Prime
158-160. More Than Meets the Eye #1-3
161-163. Robots in Disguise #1-3
164-165. More Than Meets the Eye #4-5
166-167. Robots in Disguise #4-5
168. Spotlight - Trailcutter
169. Spotlight - Hoist
170. More Than Meets the Eye #6
171. More Than Meets the Eye Annual
172-173. More Than Meets the Eye #7-8
174-178. Robots in Disguise #6-10
179-183. More Than Meets the Eye #9-13
184. Robots in Disguise Annual
185-190. Robots in Disguise #11-16
191-192. More Than Meets the Eye #14-15
193-196. Robots in Disguise #17-20
197-203. More Than Meets the Eye #16-22
204-205. Robots in Disguise #21-22
206-217. Dark Cybertron #1-12 (contains Dark Cybertron #1, More Than Meets the Eye #23-27, Robots in Disguise #23-27 & Dark Cybertron Finale)
218-222. More Than Meets the Eye #28-32
223-227. Robots in Disguise #28-32
228-231. Windblade #1-4