That still doesn't change the fact that Eli gets more hate than any of the original YA. People hate because he was "responsible" for ruing the spell that would bring mutants back. People harp on him because he used 'roids. People say he was too sanctimonious.
And that isn't a separate issue from the fact that he isn't being used. Fan outrage broke up the marriage between Storm and Black Panther. It's not even acknowledged anymore because a segment of fans didn't like it. I haven't seen any kind of interaction between the two since that one night stand lo these many years ago.
So let's not pretend that fan reactions don't have an impact on characters sometimes.